Insertion junction: CLIP2.059875_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059875
Chromosome:chromosome 8
Location:3241558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377050 (1 of 1) 4.6.1.14 - Glycosylphosphatidylinositol diacylglycerol-lyase / VSG-lipase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCGTTCAGTAGTGCCAAATCCAGGACACGTCCCCACAGCTGATGAC
Internal bar code:ACCATAGATTGAGTGGTAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1225
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCTGTAGCTGCAGGTAG
Suggested primer 2:TCACTGCAAGGCGCTTAGAA