Insertion junction: CLIP2.059877_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059877
Chromosome:chromosome 12
Location:2685157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505200 HEL51 (1 of 1) K14777 - ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13] (DDX47, RRP3); DEAD/DEAH box helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATAGGAATTACAGGCGTTTCGCGCAGGCGATGCAATGATTGACGTGT
Internal bar code:GTGTCTCCGGTAGTAGTATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGCTTACGGAAGGTGTC
Suggested primer 2:CTGATGAGCTGGCTCGGTAG