Insertion junction: CLIP2.059879_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059879
Chromosome:chromosome 17
Location:5706741
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g740550 GT90-33,GT90F33 GT90 family protein 33; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGTTCTTCGTAGTACCGTATGGTGTGGGTGCAGGTATGAAACATGTG
Internal bar code:CTCCGTGTCACTATCAATGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTCTGGAGGAAGGTGCC
Suggested primer 2:CGACTTCCAGACACACAGCT