Insertion junction: CLIP2.059884_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059884
Chromosome:chromosome 17
Location:905605
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702650 (1 of 10) PF00505 - HMG (high mobility group) box (HMG_box); High mobility group protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCAACGCCATCGCCCACCGCAACTGTTCGCATGACTTGCAGAGACAGC
Internal bar code:GGCCTGAAGTAATCTTGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2691
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCTGAAGAAGAAGGCGG
Suggested primer 2:TCTGTTCTGCTGCAGACCTG