Insertion junction: CLIP2.059900_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059900
Chromosome:chromosome 2
Location:6332871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387650 3'UTR
Cre09.g387700 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCTTTGCGCTCCATGCGGTGCTGCCGTGCCTCCACACAGACTGCGCT
Internal bar code:TGTGTAACTTATGTGGGACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1272
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTAGTGCAGGTTGGGAC
Suggested primer 2:GGGTGGTTGAGGACTCACTG