Insertion junction: CLIP2.059904_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059904
Chromosome:chromosome 10
Location:1466418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428400 PUS7 (1 of 2) 5.4.99.24 - 23S rRNA pseudouridine(955/2504/2580) synthase; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGCCGCGCTGCAGCCGTCACCCTTCACCCGTCCCTCGGTAGCGGCC
Internal bar code:TTCTTAGCTGGTGCGTTTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1262
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCCCCTTCCAAGTTCC
Suggested primer 2:GAGTGTGAGTGGACGCTGAA