Insertion junction: CLIP2.059915_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059915
Chromosome:chromosome 3
Location:819186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146347 (1 of 3) PTHR11220//PTHR11220:SF1 - HEME-BINDING PROTEIN-RELATED // HEME-BINDING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACGAAGTCGTAGCCGGCTTGCGGGTGCGAGGTAGCGCTATAGCCGTG
Internal bar code:AGTGGGGTTAACTAAGTCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2319
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGGGAGCTCTTTGTGAG
Suggested primer 2:GTCCAGGAAGCGTTTGGAGA