Insertion junction: CLIP2.059928_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059928
Chromosome:chromosome 1
Location:87517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000550 Putative nucleotide-diphospho-sugar transferase; (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGACCCGCCAATCCCACAAGGCTAGGCAGGGCAGAAGTCGCAACTCG
Internal bar code:AGGATTTTACCCGGAAACGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1323
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGTCTCTTGCTGTGTGT
Suggested primer 2:GACCTGTTACGGTCCCTGTG