Insertion junction: CLIP2.059943_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059943
Chromosome:chromosome 11
Location:2179012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467735 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGCCATAGAGCCGGTGCTTTTTCAGCTGAAAAAGCACTGGCACTGT
Internal bar code:TAAACTGGCGTAGGCTCTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2318
LEAP-Seq percent confirming:97.8947
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAAAATATTCCGCCGCA
Suggested primer 2:TACACAAGCCTGCTGACCTG