Insertion junction: CLIP2.059947_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059947
Chromosome:chromosome 12
Location:6950432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g561300 (1 of 1) PF07989 - Centrosomin N-terminal motif 1 (Cnn_1N) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGTCAACCTTTAGCCCTAGTATACAGGGCGTACGCCAGGGGCCTAGC
Internal bar code:ACCAAGGTATTCGCTTCGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATAAGGCGGCATTAGGGAGC
Suggested primer 2:AGACGGTGTGCAAGAGAGTG