Insertion junction: CLIP2.059953_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059953
Chromosome:chromosome 1
Location:8067090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062902 (1 of 1) K15148 - mediator of RNA polymerase II transcription subunit 7 (MED7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAGGTGAGGATTAAATCAGGTTTGCGGAAGAAGAGGTGGGCGGTGCG
Internal bar code:GATCGGAGAATGGGGAGGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCTTCATCATGAGGCTTG
Suggested primer 2:CCTATTCCCCCTTCCTCCCA