Insertion junction: CLIP2.059953_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059953
Chromosome:chromosome 1
Location:8067098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062902 (1 of 1) K15148 - mediator of RNA polymerase II transcription subunit 7 (MED7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTCGCTACTTGTCCTACTTGAGCTTACTCTCCCAACACAGTCTCCGCT
Internal bar code:TTACAGTCACAAACATTTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTATTCCCCCTTCCTCCCA
Suggested primer 2:GCGCTTCATCATGAGGCTTG