Insertion junction: CLIP2.059955_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059955
Chromosome:chromosome 13
Location:2817165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801539 (1 of 1) PTHR14140:SF27 - PROTEIN SHISA-5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAACCCTGCGCGGGGGTGCCCCGGCGGTACCCTCTGCCATCCTTATGC
Internal bar code:GGTAGAACAATTCGCATCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3892
LEAP-Seq percent confirming:98.8235
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATTTCTCAGGGGTCACC
Suggested primer 2:CCGGAATGGTTTCTCTGCCT