Insertion junction: CLIP2.059957_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059957
Chromosome:chromosome 11
Location:1813373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467550 (1 of 1) 3.5.2.3 - Dihydroorotase / DHOase; Dihydroorotase/amidohydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCCTATCTTAATGTCTCCAGACATTAATTGGCCATTTTGGCCGTTT
Internal bar code:AGGATGGGTGAGATATGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCGACAAGCTGACTCTG
Suggested primer 2:CCTCCCTTGCCATGTTCCAT