Insertion junction: CLIP2.059969_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059969
Chromosome:chromosome 14
Location:3989952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g633100 (1 of 1) PF12070 - Protein of unknown function (DUF3550/UPF0682) (DUF3550) 5'UTR
Cre14.g633150 OPR66 OctotricoPeptide Repeat protein, probably a pseudogene 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCCAGATTTAGAATTGGGCGACAAAGATGGCCTATGTCACCGTGAGC
Internal bar code:TGTCGAAAGTGTACTCACAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1438
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTCTCGCAAATTCGCTG
Suggested primer 2:ACATCGGACTGGCTTGTGAG