Insertion junction: CLIP2.059970_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059970
Chromosome:chromosome 13
Location:3768887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588800 (1 of 83) IPR029044 - Nucleotide-diphospho-sugar transferases gene_edge/mRNA_edge/3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACATTATCAACCATACCGAACACCAGGGTACCCTCTACGGCCGGGG
Internal bar code:ATTTTTGTTCATTCGAATTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTCGTGCAGATATCTCA
Suggested primer 2:AGCTGGGATGAAACGTGGAG