Insertion junction: CLIP2.059973_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059973
Chromosome:chromosome 3
Location:2718664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAATGGTCAACACGCCACCCGGCAACAATACAGCCTGCCCGGGCGCA
Internal bar code:ATACGAATTATACGCCTGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2763
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTGTGTGGTCAGGAAAC
Suggested primer 2:GATGAGGACGAGGATGAGCG