Insertion junction: CLIP2.059973_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059973
Chromosome:chromosome 3
Location:2718669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800310 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAATGACTTGACGAGACATAAGGTGCCGGAGTCCATTTTACATCAGC
Internal bar code:GGGACCAACACCCAGTCTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:872
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAGGACGAGGATGAGCG
Suggested primer 2:GCGTTGTGTGGTCAGGAAAC