Insertion junction: CLIP2.059981_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059981
Chromosome:chromosome 9
Location:5556637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409350 RLI1 (1 of 1) K06174 - ATP-binding cassette, sub-family E, member 1 (ABCE1); Fe-S ABC transporter 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCACACAACCTCGGTCCCACTGCACACACACGACATCCATTTTTATG
Internal bar code:GTCCAATAAGGAATGAAAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1143
LEAP-Seq percent confirming:55.8824
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGGAGCAGATATGCCA
Suggested primer 2:TGCACTCCTGACGACACTTC