Insertion junction: CLIP2.059995_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059995
Chromosome:chromosome 1
Location:336616
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g001800 MLCK1,FAP403 (1 of 4) PTHR24361//PTHR24361:SF411 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED; Flagellar Associated Protein 403 3'UTR
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCAGGCCACCTTTTACTCCATCCAGGCCCCACCATCCGAGGTTCTAG
Internal bar code:AGCGTCAGGATACGGATAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:288
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTTGACAAACACGCATT
Suggested primer 2:CCCGTGGACTGTTCGTAACA