Insertion junction: CLIP2.059996_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059996
Chromosome:chromosome 17
Location:4523492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731466 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTCGCTGGGCCAGTATTAACAACATTCCCCCCTCCTTTCCCACTTCC
Internal bar code:TACTATGACAGGCGCGTTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1408
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAACACCAACGTGCAGG
Suggested primer 2:GAGAAGCACGGACTGACACA