Insertion junction: CLIP2.060000_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060000
Chromosome:chromosome 12
Location:3209211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499950 CPL18 (1 of 2) PF07819 - PGAP1-like protein (PGAP1); possible serine esterase 3'UTR
Cre12.g500000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTATTACGGCTGGTGCCAGCGGACACAGCGCCTGACCCAGCAAAGGTC
Internal bar code:GTCAGAACGATATGTATCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1216
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGTACTTGACTGGGGCG
Suggested primer 2:GGTCAGCAGGTAAAGTGCCT