Insertion junction: CLIP2.060001_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060001
Chromosome:chromosome 17
Location:2648497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716800 XUV7 Xanthine/uracil/vitamin C permease-like, sodium-dependent 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGCGGGCACGCCGGTCAGTCCCGGCCCGTCAATGCCTGTCGAACGCCG
Internal bar code:CGGGGCGCGGAATAGGGCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATCAACAACCGCAACG
Suggested primer 2:CGGTTGTTGTGCTGCTTTGA