Insertion junction: CLIP2.060006_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060006
Chromosome:chromosome 16
Location:5171301
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g685100 (1 of 3) PTHR13748//PTHR13748:SF43 - COBW-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTTACCTGCCATCTCTCTGCCTTTGTTATGCGGCAGGGCTGCGGTGA
Internal bar code:CGGGCCACGCCCTTAATTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGCAGGGCGATACAGAC
Suggested primer 2:CAAGCGGCGATCATCACTTG