Insertion junction: CLIP2.060007_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060007
Chromosome:chromosome 3
Location:2531987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159600 (1 of 5) IPR008274 - Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTATGATGCCCCTGCACCTAACCACAGGCATCCAGATGAGGCCCGG
Internal bar code:GATGGCCGTCCTCCATTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATCTGCGCCTGTGG
Suggested primer 2:TCGCATGGGAACTCTTGCAT