Insertion junction: CLIP2.060007_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.060007
Chromosome:chromosome 3
Location:2531987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159600 (1 of 5) IPR008274 - Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATACATTGTGAATGGCAACTGTATTGAGTCAATTGCATTCTTCGTGGC
Internal bar code:GATGGCCGTCCTCCATTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3925
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:124
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCATGGGAACTCTTGCAT
Suggested primer 2:CTGCATCTGCGCCTGTGG