Insertion junction: CLIP2.060011_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060011
Chromosome:chromosome 9
Location:253637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386754 (1 of 10) PF13578 - Methyltransferase domain (Methyltransf_24) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTGCTATCGCCTGGCCGGGCGCCCGGAGCGCGAGGAATGCGCGTCA
Internal bar code:TAGGCCATTTTGTTCTATCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACGGCTGGGTATTGTCA
Suggested primer 2:CGCTGGTGGTAGCCTGATAG