Insertion junction: CLIP2.060017_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060017
Chromosome:chromosome 5
Location:1257777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241637 FAP32,IFT46 Intraflagellar transport protein 46; (1 of 1) PTHR13376//PTHR13376:SF0 - UNCHARACTERIZED // INTRAFLAGELLAR TRANSPORT PROTEIN 46 HOMOLOG 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATAAGCTCAAGGTTGCCCTGCACAACTCTGTATCGGCTGCGGTTCGG
Internal bar code:GTTAAATGTAAAAATCAGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3989
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGCTTGCGTTTGATG
Suggested primer 2:CCGACTCACTCAGGTTCACC