Insertion junction: CLIP2.060019_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060019
Chromosome:chromosome 15
Location:1276920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801727 NCL66 Nuclear Control of chloroplast-Like 66; (1 of 39) PF08373 - RAP domain (RAP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGATGGGTGATGGGGGTTACATTCATGATTAGTTAAGGAAGTGGTAGA
Internal bar code:GCTTTAGTTCAATTAACTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1700
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCTGTGTCTGTGTCTGC
Suggested primer 2:AATGCAGACAGAGGTGGTGG