Insertion junction: CLIP2.060021_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060021
Chromosome:chromosome 6
Location:4764219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGTAAGGCAGGTTGGTGAAGTCCCGTAGGGTGCACGCTGTCCCGGAG
Internal bar code:CTCCAACAGGCAGTCTTAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1645
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGGACATGAGACAACCA
Suggested primer 2:TTTGTTTGCTGCGGGTTAGC