Insertion junction: CLIP2.060022_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060022
Chromosome:chromosome 9
Location:3451148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395954 3'UTR
lncRNA_TCONS_00132499 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTATCTGCCCTCACACCCCCTAGAACCTTTAGGTAGACCTGCTACCC
Internal bar code:GAGATTTTAGGTCTTGATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:716
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAACCCCACAGAACGTTA
Suggested primer 2:ATCCCCGGTCATAGGTTGGA