Insertion junction: CLIP2.060025_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.060025
Chromosome:chromosome 3
Location:643019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145647 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAATACCTCCAACAAATAAGACATCTTAATATTCCACAGTGCCGTGC
Internal bar code:CAGTGAGCGTGACTATCATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:740
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATAATGCATGCGACGCAACC
Suggested primer 2:TGCTAACCCGCAGCTAACAA