Insertion junction: CLIP2.060028_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060028
Chromosome:chromosome 7
Location:4921041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346672 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGGATTGGGCGTCAAGTGGCGCCGGCAGCAATACCGTATTCAGGGCC
Internal bar code:CAGGAGCACAATTAGGGAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1697
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAACGACAACGGAGCAG
Suggested primer 2:TCGAATCACCCGTGCTCAAA