Insertion junction: CLIP2.060035_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060035
Chromosome:chromosome 9
Location:1361313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400312 (1 of 5) IPR001680//IPR011047//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTTTGGAGACTAGTTGTGACCTAGAGTCGGGATCGCGAGGAGGCCTC
Internal bar code:CTCTTTCGCTGGTGACTACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5534
LEAP-Seq percent confirming:77.451
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACTAGAGGCCTCGGTT
Suggested primer 2:CCAAAAGAGAACGCGCCAAA