Insertion junction: CLIP2.060035_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060035
Chromosome:chromosome 9
Location:1361314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400312 (1 of 5) IPR001680//IPR011047//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTTGAGCCTTAATCAAACGTTGGAGGACTTTATGGTTGCTAAACGT
Internal bar code:CTCTTTCGCTGGTGACTACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAAGAGAACGCGCCAAA
Suggested primer 2:TGCTACTAGAGGCCTCGGTT