Insertion junction: CLIP2.060037_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060037
Chromosome:chromosome 9
Location:866795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403500 (1 of 1) PF12796//PF13637//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCTGCGTGCATGCGGCCTTCCGGCCACCGCATCCAGTCTCCCATCAT
Internal bar code:GTTGGAAGATGTATCACCTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3759
LEAP-Seq percent confirming:93.4426
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGATAGTTGTAGTGCCG
Suggested primer 2:GCCGTCAAGGGACATTCTCA