Insertion junction: CLIP2.060038_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060038
Chromosome:chromosome 12
Location:3229654
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g499700 MFT3,MAE3 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATGGCTGGGTGCGCTGTAACCCTGCCACCGGTACCCGTTCCACAAGT
Internal bar code:GATTACTATGTCTTGGGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:726
LEAP-Seq percent confirming:2.7027
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTGAGCAGTGCATTCTG
Suggested primer 2:GTACGGCTATGTGGGTCGAG