Insertion junction: CLIP2.060041_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060041
Chromosome:chromosome 12
Location:9741373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552827 (1 of 3) PTHR36732:SF1 - GLYCINE-RICH PROTEIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCTGCATTGCGATGGGCGAACGGTCCCAACCAGGTACTGCGCTTTC
Internal bar code:AGGTGGGCTTGAGTCTTATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1554
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGCCACAGTTTCCTTTG
Suggested primer 2:TATTCCACGTCAGGCAGCTG