Insertion junction: CLIP2.060042_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060042
Chromosome:chromosome 1
Location:7418355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g052300 E2F1 (1 of 1) K06620 - transcription factor E2F3 (E2F3); Transcription factor, E2F and DP-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTTGTGTAAACCGCGTGAGTCGTTACACGGTGTTAGTGTGGTGGTA
Internal bar code:GTAGCCTTCATTTGATGTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAATCGGTTGCTCCCAG
Suggested primer 2:GCGATTGGTGGGGTACTCAA