Insertion junction: CLIP2.060043_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060043
Chromosome:chromosome 17
Location:222910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697350 (1 of 1) K12861 - pre-mRNA-splicing factor SPF27 (BCAS2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCGGCTGTGCTTTGAACCTACCGATCGCTTCTCGGACCCAAGCTGCT
Internal bar code:ACGAAAAAAGGTAGTGTCCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:576
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGTGTGTGGGTGGTGA
Suggested primer 2:TTCACGGGTACAGGGAAAGC