Insertion junction: CLIP2.060043_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060043
Chromosome:chromosome 17
Location:222919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697350 (1 of 1) K12861 - pre-mRNA-splicing factor SPF27 (BCAS2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGAGGCGTTGGTCCTAGTAGGTCATTCTATCGATTGATGCAATAAGT
Internal bar code:TGGGCCGCTTACAGGACCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACGGGTACAGGGAAAGC
Suggested primer 2:TTTGTGTGTGTGGGTGGTGA