Insertion junction: CLIP2.060044_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060044
Chromosome:chromosome 11
Location:1107637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467674 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGGCACGCAATACTGGCACCCAGGGTTCCATTGAGACGAAACAGGC
Internal bar code:GAATACTATCATTACGCTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2931
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACCTCTGCATAGCCCCA
Suggested primer 2:CGGACATGCAAGCGGTTATG