Insertion junction: CLIP2.060051_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060051
Chromosome:chromosome 8
Location:3151545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376250 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGTTCAGTCACCGGCATTGCCTCATTGACTTCCAGTCCTGCAAGCC
Internal bar code:AGGGAACTGGTGTTCCGACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2115
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTGAGGACTATGCGGT
Suggested primer 2:AGCAGACAACTGTGCGATGA