Insertion junction: CLIP2.060051_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.060051
Chromosome:chromosome 8
Location:3151582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376250 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCACCGACTGCTGCGGCAGCTGTAGTGTTGCTGACTTCCTGTTTTGC
Internal bar code:AACAGCGGTTGTGGCAGTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5738
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGACAACTGTGCGATGA
Suggested primer 2:AGGAGTGAGGACTATGCGGT