Insertion junction: CLIP2.060052_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.060052
Chromosome:chromosome 17
Location:5396837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738550 (1 of 1) K00774 - poly [ADP-ribose] polymerase 16 (PARP16) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCACTCCCGTCATCGCAAGCGCCCGGGCTCTCAAGATGGTTGAGTC
Internal bar code:AGTGCGCAATTACAGCGACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTTTGTCCCAGCCCAAA
Suggested primer 2:GCCGCAAAACCGAACTTGAT