Insertion junction: CLIP2.060055_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060055
Chromosome:chromosome 2
Location:6102258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119500 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCAGAACCACTCAAAATAGATTGGGGGCTGAACTCCCATTCCAATT
Internal bar code:AGTATTAGTCGTCGAGGCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2925
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTAAGACGCCGCGGAAT
Suggested primer 2:CAGCAAACCCCTCAGCAAAC