Insertion junction: CLIP2.060058_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.060058
Chromosome:chromosome 12
Location:6063832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534945 (1 of 2) K18740 - exonuclease 3'-5' domain-containing protein 1 (EXD1, EGL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGAGAGATGCATGGGGCTGACCCCTGTCCATAGGCTGCCTCTAGGCGC
Internal bar code:TAGGTTCCGATGTGAGTAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGCTTTTGGTGCATTGA
Suggested primer 2:GGCACCTCGCTTATTGCATG