Insertion junction: CLIP2.060060_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.060060
Chromosome:chromosome 10
Location:5399233
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g801181 5'UTR_intron
Cre10.g801182 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGTTTGTTAAGTACATAGGGCGCATGCTGGGCGCGTTCCGGGAGAA
Internal bar code:ACAGCGTCCATTAACTAAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3045
LEAP-Seq percent confirming:1.5625
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACCCTCAGCGAAACTTC
Suggested primer 2:CGTTGGGAGCTCATGACTGT