Insertion junction: CLIP2.060063_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.060063
Chromosome:chromosome 7
Location:4483260
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g343500 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGTGCGCAGCCAGGCTGAGTGGTCAACGCGTCGCGGCGCACCCGCTG
Internal bar code:TTGGAATTTTGTCGTATAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5724
LEAP-Seq percent confirming:36.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCACGAGCATGCCATCA
Suggested primer 2:TCACGTCAACAGTGCAACCT