Insertion junction: CLIP2.060065_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.060065
Chromosome:chromosome 14
Location:406895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610582 (1 of 1) IPR000210//IPR003072//IPR011333 - BTB/POZ domain // Orphan nuclear receptor, NOR1 type // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACCCACACTCTCGAACAGCTAGCCAGCCCGTCAGTCCTGGTGCAGCC
Internal bar code:GCCTTCATATAAAGATTCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1587
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGCCGCGTGTCAATAGG
Suggested primer 2:CAGTAGAGGCTCCAACGGTG